Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAF9BTATA-box binding protein associated factor 9b. (152 aa)    
Predicted Functional Partners:
TAF12
TATA-box binding protein associated factor 12.
   
 0.987
TAF2
TATA-box binding protein associated factor 2.
    
 0.985
ENSVPAP00000002875
annotation not available
   
 0.985
TAF5
TATA-box binding protein associated factor 5.
    
 0.984
TADA3
Transcriptional adaptor 3.
    
 0.983
TAF4B
TATA-box binding protein associated factor 4b.
    
 0.983
TAF8
TATA-box binding protein associated factor 8.
   
 0.982
TADA2B
Transcriptional adaptor 2B.
    
 0.979
GTF2A2
General transcription factor IIA subunit 2.
   
 0.978
ENSVPAP00000002111
annotation not available
    
 0.975
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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