Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001121annotation not available (1032 aa)    
Predicted Functional Partners:
TMEM30A
Transmembrane protein 30A.
    
 0.949
ENSVPAP00000001906
annotation not available
 
  
 0.946
ADGRV1
Adhesion G protein-coupled receptor V1.
    
 
 0.710
TMC1
Transmembrane channel like 1.
    
 0.709
SLC17A8
Solute carrier family 17 member 8.
    
 
 0.709
SLC26A5
Solute carrier family 26 member 5.
  
 
 0.705
PCDH15
Protocadherin related 15.
    
 
 0.699
USH2A
Usherin.
   
 
 0.693
COCH
Cochlin.
    
 
 0.687
CLCA2
Chloride channel accessory 2.
    
 0.685
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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