Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZMYM4Zinc finger MYM-type containing 4. (1534 aa)    
Predicted Functional Partners:
ZMYM2
Zinc finger MYM-type containing 2.
   
   0.958
KDM1A
Lysine demethylase 1A.
   
 0.950
ENSVPAP00000006076
annotation not available
   
 0.902
ENSVPAP00000009161
annotation not available
   
 
 0.787
DYNLL1
Dynein light chain LC8-type 1.
    
 
 0.777
CIPC
CLOCK interacting pacemaker.
    
   0.769
ZNF318
Zinc finger protein 318.
   
 0.765
UBQLN4
Ubiquilin 4.
    
 0.752
ADNP
Activity dependent neuroprotector homeobox.
   
 
 0.719
FKBP9
FKBP prolyl isomerase 9.
    
 
 0.699
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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