Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001134annotation not available (325 aa)    
Predicted Functional Partners:
MS4A13
Membrane spanning 4-domains A13.
    
   0.771
SLC30A8
Solute carrier family 30 member 8.
    
 
 0.771
SLC39A12
Solute carrier family 39 member 12.
    
 
 0.696
SLC30A10
Solute carrier family 30 member 10.
  
 
 
 0.683
FAM102B
Family with sequence similarity 102 member B.
      
 0.621
GAPT
GRB2 binding adaptor protein, transmembrane.
      
 0.612
DDIAS
DNA damage induced apoptosis suppressor.
    
 
 0.605
DAPP1
Dual adaptor of phosphotyrosine and 3-phosphoinositides 1.
      
 0.597
SLC30A9
Solute carrier family 30 member 9.
      
 0.592
TP53TG5
TP53 target 5.
      
 0.590
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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