Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATP5MPLATP synthase membrane subunit 6.8PL. (60 aa)    
Predicted Functional Partners:
ENSVPAP00000003988
annotation not available
   
 0.999
ATP5MD
ATP synthase membrane subunit DAPIT.
   
 0.999
ATP5PD
ATP synthase peripheral stalk subunit d.
   
 0.998
ATP5F1E
ATP synthase F1 subunit epsilon.
   
 0.997
ATP5MG
ATP synthase membrane subunit g.
   
 0.996
ATP5PF
ATP synthase peripheral stalk subunit F6.
   
 0.996
ENSVPAP00000008522
annotation not available
   
 0.996
ATP5PB
ATP synthase peripheral stalk-membrane subunit b.
   
 0.995
ATP8
ATP synthase F0 subunit 8.
   
 0.995
ATP6
ATP synthase F0 subunit 6.
   
 0.994
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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