Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CENPACentromere protein A. (106 aa)    
Predicted Functional Partners:
CENPN
Centromere protein N.
   
 0.996
CDC20B
Cell division cycle 20B.
   
 0.996
ENSVPAP00000004103
annotation not available
   
 0.993
AURKB
Aurora kinase B.
   
 
 0.991
CCNA2
Cyclin A2.
   
 0.990
CDK1
Cyclin dependent kinase 1.
   
 0.990
RSF1
Remodeling and spacing factor 1.
    
 0.989
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.988
KIF2C
Kinesin family member 2C.
   
 0.986
MIS18A
MIS18 kinetochore protein A.
   
 0.985
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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