Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DPYSL5Dihydropyrimidinase like 5. (564 aa)    
Predicted Functional Partners:
DPYSL3
Dihydropyrimidinase like 3.
    
  0.980
ENSVPAP00000009579
annotation not available
    
  0.926
DPYS
Dihydropyrimidinase.
    
  0.926
DPYD
Dihydropyrimidine dehydrogenase.
  
 0.897
DHODH
Dihydroorotate dehydrogenase (quinone).
  
 0.863
ENSVPAP00000003380
annotation not available
   
  0.847
CPS1
Carbamoyl-phosphate synthase 1.
  
 0.829
TMEM116
Transmembrane protein 116.
  
 0.818
UMPS
Uridine monophosphate synthetase.
  
  
 0.817
GOLT1B
Golgi transport 1B.
  
 
 0.809
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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