Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001160annotation not available (405 aa)    
Predicted Functional Partners:
KRT222
Keratin 222.
      
 0.661
ECHDC1
ethylmalonyl-CoA decarboxylase 1.
      
 0.605
PREP
Prolyl endopeptidase.
      
 0.592
MIB1
Mindbomb E3 ubiquitin protein ligase 1.
    
 
 0.572
HSDL2
Hydroxysteroid dehydrogenase like 2.
   
 
 0.559
ENSVPAP00000011245
annotation not available
      
 0.516
ENSVPAP00000011636
annotation not available
      
 0.516
ENSVPAP00000005769
annotation not available
      
 0.501
PBLD
Phenazine biosynthesis like protein domain containing.
     
 0.500
ENSVPAP00000011095
annotation not available
   
  
 0.500
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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