Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001181annotation not available (806 aa)    
Predicted Functional Partners:
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 
 0.966
ENSVPAP00000010491
annotation not available
    
   0.908
RBM45
RNA binding motif protein 45.
    
   0.852
STAU1
Staufen double-stranded RNA binding protein 1.
    
 
 0.843
RC3H2
Ring finger and CCCH-type domains 2.
    
   0.826
ENSVPAP00000011180
annotation not available
    
 
 0.809
ERAL1
Era like 12S mitochondrial rRNA chaperone 1.
   
 
 0.798
YBX1
Y-box binding protein 1.
    
 
 0.789
FMR1
FMRP translational regulator 1.
    
 
 0.714
MTERF3
Mitochondrial transcription termination factor 3.
   
   0.661
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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