Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001203annotation not available (666 aa)    
Predicted Functional Partners:
PRMT5
Protein arginine methyltransferase 5.
   
 0.980
EIF2S2
Eukaryotic translation initiation factor 2 subunit beta.
   
 
 0.966
EIF2S1
Eukaryotic translation initiation factor 2 subunit alpha.
   
   0.966
WDR77
WD repeat domain 77.
  
 0.890
METTL23
Methyltransferase like 23.
    
 
 0.755
ENSVPAP00000010070
annotation not available
   
 0.681
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
    
 
 0.650
PRMT3
Protein arginine methyltransferase 3.
   
  
 0.634
LOC102532015
Histone H3.
   
 0.628
CENPA
Centromere protein A.
   
 0.625
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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