Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZEB1Zinc finger E-box binding homeobox 1. (900 aa)    
Predicted Functional Partners:
SMARCA2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
    
 0.954
SIRT1
Sirtuin 1.
    
 0.953
KMT5A
Lysine methyltransferase 5A.
    
 0.902
VIM
Vimentin.
    
 
 0.854
CDH1
Cadherin 1.
    
 
 0.809
HDAC2
Histone deacetylase 2.
    
 0.802
MITF
Melanocyte inducing transcription factor.
     
 0.790
ENSVPAP00000010202
annotation not available
    
 0.784
USP54
Ubiquitin specific peptidase 54.
    
   0.774
USP10
Ubiquitin specific peptidase 10.
    
   0.774
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.