Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001218annotation not available (658 aa)    
Predicted Functional Partners:
CNOT10
CCR4-NOT transcription complex subunit 10.
   
 0.999
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 0.999
CNOT4
CCR4-NOT transcription complex subunit 4.
   
 0.999
ENSVPAP00000011346
annotation not available
    
 0.999
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 0.998
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 0.998
CNOT6L
CCR4-NOT transcription complex subunit 6 like.
    
 0.997
CNOT8
CCR4-NOT transcription complex subunit 8.
    
 0.995
CNOT9
CCR4-NOT transcription complex subunit 9.
    
 0.994
CNOT6
CCR4-NOT transcription complex subunit 6.
    
 0.993
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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