Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MAGT1Magnesium transporter 1. (335 aa)    
Predicted Functional Partners:
DAD1
Defender against cell death 1.
   
 0.999
STT3B
STT3 oligosaccharyltransferase complex catalytic subunit B.
   
 0.998
RPN2
Ribophorin II.
   
 0.998
TMEM258
Transmembrane protein 258.
    
 0.996
STT3A
STT3 oligosaccharyltransferase complex catalytic subunit A.
   
 0.996
ENSVPAP00000005526
annotation not available
     
 0.977
TUSC3
Tumor suppressor candidate 3.
  
 
0.955
KRTCAP2
Keratinocyte associated protein 2.
     
 0.934
ENSVPAP00000002917
annotation not available
    
  0.907
ENSVPAP00000005034
annotation not available
    
 0.851
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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