Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFPAlpha fetoprotein. (609 aa)    
Predicted Functional Partners:
ENSVPAP00000003591
annotation not available
   
 0.904
ENSVPAP00000005374
annotation not available
   
 
 0.857
ENSVPAP00000001221
annotation not available
   
 0.762
FGG
Fibrinogen gamma chain.
   
 
 0.756
ENSVPAP00000005749
annotation not available
   
 0.746
ENSVPAP00000006343
annotation not available
   
 0.745
FGB
Fibrinogen beta chain.
   
  
 0.743
GPC3
Glypican 3.
   
 
 0.717
RBP4
Retinol binding protein 4.
   
 
 0.700
ENSVPAP00000000842
annotation not available
    
 0.699
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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