Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001233annotation not available (266 aa)    
Predicted Functional Partners:
STK3
Serine/threonine kinase 3.
    
 0.988
STK4
Serine/threonine kinase 4.
    
 0.893
MDM2
MDM2 proto-oncogene.
    
 
 0.826
KDM3A
Lysine demethylase 3A.
    
   0.793
SAV1
Salvador family WW domain containing protein 1.
    
 
 0.670
APBB2
Amyloid beta precursor protein binding family B member 2.
      
 0.631
USP10
Ubiquitin specific peptidase 10.
      
 0.610
INSYN2B
Inhibitory synaptic factor family member 2B.
      
 0.608
ENSVPAP00000001972
annotation not available
      
 0.603
IKZF2
IKAROS family zinc finger 2.
      
 0.592
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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