Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001235annotation not available (325 aa)    
Predicted Functional Partners:
ZNF689
Zinc finger protein 689.
    
 
 0.637
ENSVPAP00000004444
annotation not available
      
 0.547
SACM1L
SAC1 like phosphatidylinositide phosphatase.
    
 
 0.519
MLF1
Myeloid leukemia factor 1.
      
 0.519
SESTD1
SEC14 and spectrin domain containing 1.
      
 0.507
PPTC7
PTC7 protein phosphatase homolog.
    
   0.503
ENSVPAP00000010273
annotation not available
      
 0.498
PLD1
Phospholipase D1.
   
 
 0.497
ENSVPAP00000005494
annotation not available
   
 
 0.497
PCYT1B
Phosphate cytidylyltransferase 1, choline, beta.
    
 
 0.497
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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