Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM167ATransmembrane protein 167A. (72 aa)    
Predicted Functional Partners:
FAM162B
Family with sequence similarity 162 member B.
      
 0.882
ENSVPAP00000011339
annotation not available
      
 0.868
ENSVPAP00000005755
annotation not available
   
 
 0.812
YPEL5
Yippee like 5.
      
 0.769
WDR7
WD repeat domain 7.
      
 0.753
SCFD1
Sec1 family domain containing 1.
   
  
 0.713
NPM3
Nucleophosmin/nucleoplasmin 3.
      
 0.681
RBM41
RNA binding motif protein 41.
      
 0.671
YIPF5
Yip1 domain family member 5.
   
    0.664
GOLGA5
Golgin A5.
   
  
 0.659
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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