Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FRMD4BFERM domain containing 4B. (976 aa)    
Predicted Functional Partners:
ENSVPAP00000001582
annotation not available
    
 
 0.883
PLEKHA5
Pleckstrin homology domain containing A5.
    
 
 0.688
TMTC4
Transmembrane O-mannosyltransferase targeting cadherins 4.
      
 0.665
ENSVPAP00000001972
annotation not available
    
 
 0.617
USP3
Ubiquitin specific peptidase 3.
    
 
 0.610
DYNLRB2
Dynein light chain roadblock-type 2.
      
 0.603
SLC35F1
Solute carrier family 35 member F1.
      
 0.599
ENSVPAP00000007220
annotation not available
      
 0.584
FRMD6
FERM domain containing 6.
    
 
 0.566
LATS1
Large tumor suppressor kinase 1.
    
 
 0.550
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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