Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001279annotation not available (561 aa)    
Predicted Functional Partners:
ITGA1
Integrin subunit alpha 1.
    
 0.949
ITGA2
Integrin subunit alpha 2.
    
 0.949
ITGB1
Integrin subunit beta 1.
    
 0.938
ITGAV
Integrin subunit alpha V.
   
 0.933
CD44
CD44 molecule (Indian blood group).
    
 0.912
SDC4
Syndecan 4.
    
  0.910
ENSVPAP00000004726
annotation not available
    
 0.797
ENSVPAP00000003830
annotation not available
    
 0.784
ITGB6
Integrin subunit beta 6.
    
 0.779
ITGA8
Integrin subunit alpha 8.
    
 0.764
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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