Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC1A2Solute carrier family 1 member 2. (568 aa)    
Predicted Functional Partners:
PLP1
Proteolipid protein 1.
   
 
 0.937
TNR
Tenascin R.
   
    0.835
SLC6A1
Solute carrier family 6 member 1.
  
  
 0.809
MAP2
Microtubule associated protein 2.
   
 
 0.801
SLC17A6
Solute carrier family 17 member 6.
   
 
 0.763
AQP4
Aquaporin 4.
  
  
 0.742
ENSVPAP00000002547
annotation not available
   
  
 0.724
SLC15A1
Solute carrier family 15 member 1.
  
 
 0.718
SLC7A2
Solute carrier family 7 member 2.
   
 
 0.707
SLC3A1
Solute carrier family 3 member 1.
  
 
 0.703
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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