Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC17A6Solute carrier family 17 member 6. (582 aa)    
Predicted Functional Partners:
SLC18A3
Solute carrier family 18 member A3.
     
 0.958
SYT1
Synaptotagmin 1.
   
 
 0.876
GAD2
Glutamate decarboxylase 2.
   
 
 0.871
GAD1
Glutamate decarboxylase 1.
   
 
 0.812
SLC6A5
Solute carrier family 6 member 5.
   
  
 0.775
RAB3B
RAB3B, member RAS oncogene family.
   
 0.772
SNAP25
Synaptosome associated protein 25.
   
 0.772
SLC1A2
Solute carrier family 1 member 2.
   
 
 0.763
SYP
Synaptophysin.
   
 
 0.761
ENSVPAP00000009053
annotation not available
     
 0.703
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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