Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SVIPSmall VCP interacting protein. (77 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
    
 
 0.975
DERL1
Derlin 1.
    
 
 0.881
AMFR
Autocrine motility factor receptor.
    
 
 0.870
SELENOS
Selenoprotein S.
    
 
 0.835
GLRX3
Glutaredoxin 3.
      
 0.825
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 
 0.644
SPATA5
Spermatogenesis associated 5.
    
 
 0.644
ENSVPAP00000005132
annotation not available
      
 0.632
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
      
 0.606
YIPF5
Yip1 domain family member 5.
    
 
 0.516
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.