Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBXL4F-box and leucine rich repeat protein 4. (621 aa)    
Predicted Functional Partners:
CUL1
Cullin 1.
    
 0.981
SKP1
S-phase kinase associated protein 1.
    
 0.976
BNIP3L
BCL2 interacting protein 3 like.
    
 
 0.965
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
      
 0.916
PSMC2
Proteasome 26S subunit, ATPase 2.
     
 0.776
CUL3
Cullin 3.
    
 0.772
PSMB1
Proteasome 20S subunit beta 1.
    
 0.757
POU3F4
POU class 3 homeobox 4.
    
 
 0.739
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
      
 0.737
RBX1
Ring-box 1.
    
 0.731
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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