Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRDM13PR/SET domain 13. (712 aa)    
Predicted Functional Partners:
ENSVPAP00000011268
annotation not available
    
 0.757
TPD52L1
TPD52 like 1.
      
 0.682
ENSVPAP00000002731
annotation not available
    
 0.618
TFAP2A
Transcription factor AP-2 alpha.
    
 
 0.618
ENSVPAP00000000430
annotation not available
    
 
 0.588
ENSVPAP00000003396
annotation not available
    
 0.582
ENSVPAP00000009569
annotation not available
    
 
 0.571
CCNC
Cyclin C.
    
 
 0.552
ENSVPAP00000007356
annotation not available
    
 
 0.541
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.530
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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