Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOXL4Lysyl oxidase like 4. (754 aa)    
Predicted Functional Partners:
NUDCD1
NudC domain containing 1.
    
   0.894
DHX15
DEAH-box helicase 15.
    
   0.894
TLL2
Tolloid like 2.
    
 0.646
TLL1
Tolloid like 1.
    
 0.646
MFAP5
Microfibril associated protein 5.
   
 
 0.606
ARID4A
AT-rich interaction domain 4A.
    
 0.589
ARID4B
AT-rich interaction domain 4B.
    
 0.589
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.587
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.578
TRIP13
Thyroid hormone receptor interactor 13.
    
   0.567
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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