Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFR3AEFR3 homolog A. (790 aa)    
Predicted Functional Partners:
TTC7B
Tetratricopeptide repeat domain 7B.
   
 
 0.937
ENSVPAP00000003149
annotation not available
    
   0.933
ENSVPAP00000009956
annotation not available
   
 
 0.925
SEMA3E
Semaphorin 3E.
      
 0.923
COL5A2
Collagen type V alpha 2 chain.
      
 0.906
ENSVPAP00000000336
annotation not available
    
 
 0.635
NECAB1
N-terminal EF-hand calcium binding protein 1.
    
 
 0.635
RHEX
Regulator of hemoglobinization and erythroid cell expansion.
      
 0.630
KATNAL2
Katanin catalytic subunit A1 like 2.
   
  
 0.619
COG5
Component of oligomeric golgi complex 5.
   
  
 0.619
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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