Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001322annotation not available (537 aa)    
Predicted Functional Partners:
PLA2G4A
Phospholipase A2 group IVA.
     
 0.752
ENSVPAP00000003853
annotation not available
      
 0.720
OTOL1
Otolin 1.
      
 0.685
DNAAF4
Dynein axonemal assembly factor 4.
      
 0.659
TECTB
Tectorin beta.
      
 0.524
CBLN1
Cerebellin 1 precursor.
      
 0.524
LASP1
LIM and SH3 protein 1.
      
 0.523
NEBL
Nebulette.
      
 0.523
SPARCL1
SPARC like 1.
      
 0.521
ATP2B4
ATPase plasma membrane Ca2+ transporting 4.
      
 0.513
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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