Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACHEAcetylcholinesterase (Cartwright blood group). (439 aa)    
Predicted Functional Partners:
ENSVPAP00000006837
annotation not available
    
 
 0.940
APP
Amyloid beta precursor protein.
    
 0.760
MUSK
Muscle associated receptor tyrosine kinase.
    
 
 0.723
ENSVPAP00000010123
annotation not available
      
 0.690
RGN
Regucalcin.
     
 0.689
PSEN1
Presenilin 1.
      
 0.683
APOB
Apolipoprotein B.
    
 0.668
NRXN3
Neurexin 3.
   
 0.661
NRXN1
Neurexin 1.
   
 0.661
ENSVPAP00000000281
annotation not available
    
 
 0.637
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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