Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001340annotation not available (707 aa)    
Predicted Functional Partners:
ENSVPAP00000002735
annotation not available
    
 0.862
SUMO1
Small ubiquitin like modifier 1.
    
 0.656
ZWINT
ZW10 interacting kinetochore protein.
    
   0.617
UBD
Ubiquitin D.
    
 0.610
FERMT1
Fermitin family member 1.
      
 0.609
RAI2
Retinoic acid induced 2.
    
 0.588
ENSVPAP00000007276
annotation not available
    
 0.575
TAB2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 
 0.556
ENSVPAP00000001408
annotation not available
    
 0.551
ENSVPAP00000009542
annotation not available
   
 0.545
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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