Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNRC6BTrinucleotide repeat containing adaptor 6B. (1582 aa)    
Predicted Functional Partners:
AGO4
Argonaute RISC component 4.
    
 0.830
AGO1
Argonaute RISC component 1.
    
 0.830
AGO3
Argonaute RISC catalytic component 3.
    
 0.830
ENSVPAP00000002984
annotation not available
     
 0.651
NCKAP1
NCK associated protein 1.
    
 
 0.623
GIGYF2
GRB10 interacting GYF protein 2.
    
 
 0.622
CPSF7
Cleavage and polyadenylation specific factor 7.
      
 0.614
AKT3
AKT serine/threonine kinase 3.
   
 0.603
ENSVPAP00000008455
annotation not available
   
 0.603
ENSVPAP00000003241
annotation not available
      
 0.600
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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