Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCAF12DDB1 and CUL4 associated factor 12. (453 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 
 0.990
DCAF5
DDB1 and CUL4 associated factor 5.
    
 0.973
ENSVPAP00000008419
annotation not available
     
 0.963
DCAF6
DDB1 and CUL4 associated factor 6.
      
 0.902
CUL4B
Cullin 4B.
    
 0.871
ENSVPAP00000004906
annotation not available
   
  
 0.853
ENSVPAP00000006216
annotation not available
   
  
 0.853
CCT8
Chaperonin containing TCP1 subunit 8.
    
   0.774
DCAF8
DDB1 and CUL4 associated factor 8.
     
 0.771
ENSVPAP00000004348
annotation not available
      
 0.702
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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