Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001355annotation not available (255 aa)    
Predicted Functional Partners:
ENSVPAP00000006765
annotation not available
    
 0.984
APP
Amyloid beta precursor protein.
   
 0.964
NCAM2
Neural cell adhesion molecule 2.
    
 0.925
CNTN1
Contactin 1.
    
 0.902
GRB2
Growth factor receptor bound protein 2.
    
 0.902
CLSTN1
Calsyntenin 1.
   
 
 0.901
MAP2
Microtubule associated protein 2.
    
 
 0.899
LSAMP
Limbic system associated membrane protein.
    
 0.871
HSPA5
Heat shock protein family A (Hsp70) member 5.
    
 0.866
ENSVPAP00000010010
annotation not available
    
 
 0.856
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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