Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001363annotation not available (927 aa)    
Predicted Functional Partners:
ENSVPAP00000008291
annotation not available
    
 0.761
TRAF6
TNF receptor associated factor 6.
    
 0.734
MAP2K4
Mitogen-activated protein kinase kinase 4.
    
  0.716
ENSVPAP00000002263
annotation not available
      
 0.688
MAP2K1
Mitogen-activated protein kinase kinase 1.
    
 0.683
MAP2K5
Mitogen-activated protein kinase kinase 5.
    
 0.683
MAP2K7
Mitogen-activated protein kinase kinase 7.
    
  0.677
GAPT
GRB2 binding adaptor protein, transmembrane.
      
 0.674
TP53TG5
TP53 target 5.
      
 0.665
FAM102B
Family with sequence similarity 102 member B.
      
 0.663
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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