Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PUS3Pseudouridine synthase 3. (478 aa)    
Predicted Functional Partners:
PUS7
Pseudouridine synthase 7.
  
 
 0.895
TRUB2
TruB pseudouridine synthase family member 2.
  
 0.881
PUS7L
Pseudouridine synthase 7 like.
  
 
 0.876
TRUB1
TruB pseudouridine synthase family member 1.
  
 0.872
ELP3
Elongator acetyltransferase complex subunit 3.
   
 
 0.824
ENSVPAP00000003015
annotation not available
  
 0.821
MOCS3
Molybdenum cofactor synthesis 3.
  
 
 0.802
POLR2C
RNA polymerase II subunit C.
  
  
 0.800
BYSL
Bystin like.
   
    0.786
NGDN
Neuroguidin.
   
    0.776
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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