Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HS3ST5Heparan sulfate-glucosamine 3-sulfotransferase 5. (345 aa)    
Predicted Functional Partners:
GPC6
Glypican 6.
     
 0.719
GPC4
Glypican 4.
     
 0.719
ENSVPAP00000010746
annotation not available
      
 0.690
ENSVPAP00000010958
annotation not available
      
 0.688
EGFLAM
EGF like, fibronectin type III and laminin G domains.
     
 0.677
GLCE
Glucuronic acid epimerase.
      
 0.659
GPC3
Glypican 3.
     
 0.626
SDC4
Syndecan 4.
     
 0.624
HS6ST2
Heparan sulfate 6-O-sulfotransferase 2.
      
 0.615
HS6ST3
Heparan sulfate 6-O-sulfotransferase 3.
      
 0.615
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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