Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001424annotation not available (2453 aa)    
Predicted Functional Partners:
DDB2
Damage specific DNA binding protein 2.
    
 0.990
PCSK1
Proprotein convertase subtilisin/kexin type 1.
      
 0.923
PCSK2
Proprotein convertase subtilisin/kexin type 2.
      
 0.915
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.862
ENSVPAP00000001885
annotation not available
   
 0.848
ZRANB1
Zinc finger RANBP2-type containing 1.
    
 
 0.819
LDLR
Low density lipoprotein receptor.
      
 0.757
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
   
  0.739
EGF
Epidermal growth factor.
      
 0.733
ENSVPAP00000007130
annotation not available
    
 
 0.714
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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