Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRIG3Leucine rich repeats and immunoglobulin like domains 3. (957 aa)    
Predicted Functional Partners:
GAL3ST1
galactose-3-O-sulfotransferase 1.
    
 
 0.967
ENSVPAP00000000203
annotation not available
   
   0.965
ENSVPAP00000001575
annotation not available
    
 0.925
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.819
ENSVPAP00000009552
annotation not available
    
 0.740
TGFBR1
Transforming growth factor beta receptor 1.
   
 0.710
ENSVPAP00000009618
annotation not available
    
 0.707
SPATA17
Spermatogenesis associated 17.
    
 
 0.698
COPS6
COP9 signalosome subunit 6.
    
 0.693
ENSVPAP00000010096
annotation not available
      
 0.670
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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