Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDEM3ER degradation enhancing alpha-mannosidase like protein 3. (925 aa)    
Predicted Functional Partners:
EDEM2
ER degradation enhancing alpha-mannosidase like protein 2.
    
0.994
EDEM1
ER degradation enhancing alpha-mannosidase like protein 1.
    
0.966
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
 0.957
NUDCD1
NudC domain containing 1.
    
   0.894
ERLEC1
Endoplasmic reticulum lectin 1.
    
 
 0.880
MAN2A1
Mannosidase alpha class 2A member 1.
    
 
 0.861
ENSVPAP00000005034
annotation not available
    
 
 0.798
ENSVPAP00000000900
annotation not available
    
   0.797
STT3B
STT3 oligosaccharyltransferase complex catalytic subunit B.
    
 
 0.781
ERLIN2
ER lipid raft associated 2.
    
 
 0.781
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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