Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCAMP1Secretory carrier membrane protein 1. (260 aa)    
Predicted Functional Partners:
ENSVPAP00000001032
annotation not available
    
   0.951
SCAMP3
Secretory carrier membrane protein 3.
   
   0.892
ENSVPAP00000009095
annotation not available
      
 0.769
ITM2B
Integral membrane protein 2B.
    
 
 0.715
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
  
 0.662
CHP1
Calcineurin like EF-hand protein 1.
      
 0.618
ST8SIA2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2.
      
 0.615
CXCL10
C-X-C motif chemokine ligand 10.
      
 0.607
ERBIN
Erbb2 interacting protein.
      
 0.600
LRRC7
Leucine rich repeat containing 7.
      
 0.600
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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