Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001449annotation not available (265 aa)    
Predicted Functional Partners:
ENSVPAP00000005696
annotation not available
    
 0.637
ENSVPAP00000005199
annotation not available
    
 0.545
RPS27A
Ribosomal protein S27a.
    
 0.524
ENSVPAP00000000672
annotation not available
     
  0.445
TBK1
TANK binding kinase 1.
    
  0.420
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
  0.420
STYK1
Serine/threonine/tyrosine kinase 1.
    
 0.413
PDGFRA
Platelet derived growth factor receptor alpha.
    
 0.413
STIL
STIL centriolar assembly protein.
    
 0.413
FLT3
Fms related tyrosine kinase 3.
    
 0.413
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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