Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001455annotation not available (176 aa)    
Predicted Functional Partners:
RLBP1
Retinaldehyde binding protein 1.
    
 0.772
ZCCHC2
Zinc finger CCHC-type containing 2.
      
 0.714
SERPINB8
Serpin family B member 8.
      
 0.686
SLC26A7
Solute carrier family 26 member 7.
      
 0.612
TAC3
Tachykinin precursor 3.
      
 0.611
RDH14
Retinol dehydrogenase 14.
   
 
 0.602
ENSVPAP00000006187
annotation not available
    
 
 0.556
ENSVPAP00000010793
annotation not available
    
 
 0.551
PNPLA1
Patatin like phospholipase domain containing 1.
      
 0.523
ENSVPAP00000009082
annotation not available
      
 0.522
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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