Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001461annotation not available (221 aa)    
Predicted Functional Partners:
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
   
 0.996
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
   
 0.995
CHTOP
Chromatin target of PRMT1.
    
   0.838
RPS27A
Ribosomal protein S27a.
     
  0.817
RCC1
Regulator of chromosome condensation 1.
  
 
 0.760
GDF9
Growth differentiation factor 9.
    
 0.755
ENSVPAP00000001842
annotation not available
   
  
 0.741
ENSVPAP00000000837
annotation not available
    
 
 0.711
ENSVPAP00000006896
annotation not available
  
  
  0.698
RNF115
Ring finger protein 115.
    
 0.693
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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