Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEC24ASEC24 homolog A, COPII coat complex component. (1091 aa)    
Predicted Functional Partners:
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
   
 0.997
SEC24B
SEC24 homolog B, COPII coat complex component.
  
0.996
SEC24D
SEC24 homolog D, COPII coat complex component.
   
 0.995
ENSVPAP00000007465
annotation not available
   
 0.994
SEC31A
SEC31 homolog A, COPII coat complex component.
   
 0.992
ENSVPAP00000004561
annotation not available
   
 0.986
SEC23A
Sec23 homolog A, coat complex II component.
   
0.986
ENSVPAP00000009399
annotation not available
   
 0.980
ENSVPAP00000008436
annotation not available
   
 0.972
ENSVPAP00000001469
annotation not available
   
 0.949
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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