Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C5orf24Chromosome unknown open reading frame, human C5orf24. (188 aa)    
Predicted Functional Partners:
STRADA
STE20 related adaptor alpha.
    
   0.937
CAB39
Calcium binding protein 39.
    
   0.793
ENSVPAP00000004906
annotation not available
    
   0.633
ENSVPAP00000006216
annotation not available
    
   0.633
RPL15
Ribosomal protein L15.
      
 0.612
ZNF330
Zinc finger protein 330.
      
 0.598
UBE2I
Ubiquitin conjugating enzyme E2 I.
      
 0.504
CAB39L
Calcium binding protein 39 like.
    
   0.475
ENSVPAP00000001763
annotation not available
    
   0.448
STK39
Serine/threonine kinase 39.
    
   0.445
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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