Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001479annotation not available (969 aa)    
Predicted Functional Partners:
PLIN1
Perilipin 1.
  
 0.969
PLIN2
Perilipin 2.
  
 0.880
CEACAM16
CEA cell adhesion molecule 16, tectorial membrane component.
   
 
 0.874
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
    
 0.849
FABP4
Fatty acid binding protein 4.
   
 0.802
PPARG
Peroxisome proliferator activated receptor gamma.
   
 0.789
FABP2
Fatty acid binding protein 2.
   
 0.777
KYNU
Kynureninase.
  
 
 0.731
TDO2
Tryptophan 2,3-dioxygenase.
    
 0.726
ENSVPAP00000003598
annotation not available
   
  
 0.713
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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