Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLCO4C1Solute carrier organic anion transporter family member 4C1. (555 aa)    
Predicted Functional Partners:
CATSPERE
Catsper channel auxiliary subunit epsilon.
    
 
 0.853
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
    
 
 0.668
SLC22A5
Solute carrier family 22 member 5.
      
 0.657
CATSPER4
Cation channel sperm associated 4.
    
 
 0.626
ENSVPAP00000001474
annotation not available
    
   0.611
SLC16A2
Solute carrier family 16 member 2.
    
 0.593
SLC16A10
Solute carrier family 16 member 10.
    
 0.593
CLMN
Calmin.
      
 0.578
ENSVPAP00000008239
annotation not available
      
 0.518
ENSVPAP00000009872
annotation not available
      
 0.512
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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