STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAMPeptidylglycine alpha-amidating monooxygenase. (974 aa)    
Predicted Functional Partners:
UHMK1
U2AF homology motif kinase 1.
    
 
 0.810
IAPP
Islet amyloid polypeptide.
      
 0.718
TOR2A
Torsin family 2 member A.
      
 0.665
GDNF
Glial cell derived neurotrophic factor.
      
 0.657
ENSVPAP00000005613
annotation not available
   
  
 0.649
RASSF8
Ras association domain family member 8.
    
 
 0.611
BET1
Bet1 golgi vesicular membrane trafficking protein.
      
 0.608
NEFH
Neurofilament heavy.
      
 0.600
ARL5A
ADP ribosylation factor like GTPase 5A.
    
 
 0.567
SCG5
Secretogranin V.
   
  
 0.538
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.