Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPDZMultiple PDZ domain crumbs cell polarity complex component. (2069 aa)    
Predicted Functional Partners:
MPP5
Membrane palmitoylated protein 5.
   
 0.998
ENSVPAP00000005424
annotation not available
    
 0.963
HTR2C
5-hydroxytryptamine receptor 2C.
    
 
 0.927
AMOT
Angiomotin.
    
 
 0.926
PLEKHA2
Pleckstrin homology domain containing A2.
    
   0.828
ENSVPAP00000006166
annotation not available
    
 0.765
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.748
PRKCI
Protein kinase C iota.
    
 0.732
WWTR1
WW domain containing transcription regulator 1.
   
 0.693
MPP7
Membrane palmitoylated protein 7.
   
 0.686
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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