Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPRD1ARegulation of nuclear pre-mRNA domain containing 1A. (218 aa)    
Predicted Functional Partners:
RPRD1B
Regulation of nuclear pre-mRNA domain containing 1B.
  
0.999
RPAP2
RNA polymerase II associated protein 2.
   
 0.996
RPRD2
Regulation of nuclear pre-mRNA domain containing 2.
    
 0.992
POLR2D
RNA polymerase II subunit D.
    
  0.992
POLR2G
RNA polymerase II subunit G.
    
  0.984
GPN1
GPN-loop GTPase 1.
    
 
 0.962
ENSVPAP00000008227
annotation not available
    
 0.953
POLR2C
RNA polymerase II subunit C.
    
 0.952
POLR2B
RNA polymerase II subunit B.
   
 0.939
ENSVPAP00000006584
annotation not available
    
  0.924
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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