Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001539annotation not available (105 aa)    
Predicted Functional Partners:
CCNO
Cyclin O.
      
 0.684
ENSVPAP00000008509
annotation not available
      
 0.494
RHBDD1
Rhomboid domain containing 1.
      
 0.454
ENSVPAP00000002952
annotation not available
      
 0.444
GARS1
glycyl-tRNA synthetase 1.
      
 0.441
FARSB
phenylalanyl-tRNA synthetase subunit beta.
      
 0.437
WDFY3
WD repeat and FYVE domain containing 3.
      
 0.436
DCTN6
Dynactin subunit 6.
   
  
 0.411
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.